ODF2

Protein-coding gene in the species Homo sapiens
ODF2
Identifiers
AliasesODF2, CT134, ODF2/1, ODF2/2, ODF84, outer dense fiber of sperm tails 2
External IDsOMIM: 602015; MGI: 1098824; HomoloGene: 1907; GeneCards: ODF2; OMA:ODF2 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for ODF2
Genomic location for ODF2
Band9q34.11Start128,455,186 bp[1]
End128,501,292 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for ODF2
Genomic location for ODF2
Band2 B|2 20.79 cMStart29,779,233 bp[2]
End29,821,758 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sperm

  • right uterine tube

  • anterior pituitary

  • stromal cell of endometrium

  • sural nerve

  • canal of the cervix

  • left uterine tube

  • ganglionic eminence

  • Achilles tendon

  • right coronary artery
Top expressed in
  • seminiferous tubule

  • spermatid

  • spermatocyte

  • secondary oocyte

  • primitive streak

  • cerebellar cortex

  • renal corpuscle

  • cumulus cell

  • pituitary gland

  • superior frontal gyrus
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • structural molecule activity
  • protein binding
Cellular component
  • cytoplasm
  • ciliary basal body
  • cytosol
  • cell projection
  • spindle pole
  • outer dense fiber
  • ciliary transition fiber
  • microtubule organizing center
  • centriole
  • microtubule
  • cytoskeleton
  • nucleus
  • centrosome
  • cilium
  • motile cilium
  • sperm flagellum
  • centriolar subdistal appendage
Biological process
  • cell differentiation
  • multicellular organism development
  • G2/M transition of mitotic cell cycle
  • spermatogenesis
  • spermatid development
  • regulation of cilium assembly
  • ciliary basal body-plasma membrane docking
  • regulation of G2/M transition of mitotic cell cycle
  • protein localization
  • centriole-centriole cohesion
  • cilium organization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4957

18286

Ensembl

ENSG00000136811

ENSMUSG00000026790

UniProt

Q5BJF6

A3KGV1

RefSeq (mRNA)
NM_001242352
NM_001242353
NM_001242354
NM_002540
NM_153432

NM_153433
NM_153435
NM_153436
NM_153437
NM_153439
NM_153440
NM_001351577
NM_001351578
NM_001351579
NM_001351580
NM_001351581
NM_001351582
NM_001351583
NM_001351584
NM_001351585
NM_001351586
NM_001351587
NM_001351588

NM_001113213
NM_001113214
NM_001177659
NM_001177661
NM_013615

NM_001355136
NM_001355137
NM_001355138
NM_001369060
NM_001374179
NM_001374180
NM_001374181
NM_001374182

RefSeq (protein)
NP_001229281
NP_001229282
NP_001229283
NP_002531
NP_702910

NP_702911
NP_702913
NP_702914
NP_702915
NP_702917
NP_702918
NP_001338506
NP_001338507
NP_001338508
NP_001338509
NP_001338510
NP_001338511
NP_001338512
NP_001338513
NP_001338514
NP_001338515
NP_001338516
NP_001338517

NP_001106684
NP_001106685
NP_001171130
NP_001171132
NP_038643

NP_001342065
NP_001342066
NP_001342067
NP_001355989
NP_001361108
NP_001361109
NP_001361110
NP_001361111

Location (UCSC)Chr 9: 128.46 – 128.5 MbChr 2: 29.78 – 29.82 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Outer dense fiber protein 2, also known as cenexin, is a protein that in humans is encoded by the ODF2 gene.[5][6][7]

The outer dense fibers are cytoskeletal structures that surround the axoneme in the middle piece and principal piece of the sperm tail. The fibers function in maintaining the elastic structure and recoil of the sperm tail as well as in protecting the tail from shear forces during epididymal transport and ejaculation. Defects in the outer dense fibers lead to abnormal sperm morphology and infertility. This gene encodes one of the major outer dense fiber proteins. Multiple protein isoforms are encoded by transcript variants of this gene; however, not all isoforms and variants have been fully described.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000136811 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026790 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Shao X, Tarnasky HA, Schalles U, Oko R, van der Hoorn FA (Apr 1997). "Interactional cloning of the 84-kDa major outer dense fiber protein Odf84. Leucine zippers mediate associations of Odf84 and Odf27". J Biol Chem. 272 (10): 6105–13. doi:10.1074/jbc.272.10.6105. PMID 9045620.
  6. ^ Shao X, Murthy S, Demetrick DJ, van der Hoorn FA (Mar 1999). "Human outer dense fiber gene, ODF2, localizes to chromosome 9q34". Cytogenet Cell Genet. 83 (3–4): 221–3. doi:10.1159/000015183. hdl:1807.1/828. PMID 10072582. S2CID 1214379.
  7. ^ a b "Entrez Gene: ODF2 outer dense fiber of sperm tails 2".

Further reading

  • Kierszenbaum AL (2002). "Keratins: unraveling the coordinated construction of scaffolds in spermatogenic cells". Mol. Reprod. Dev. 61 (1): 1–2. doi:10.1002/mrd.1124. PMID 11774369. S2CID 28475473.
  • Hoyer-Fender S, Petersen C, Brohmann H, et al. (1999). "Mouse Odf2 cDNAs consist of evolutionary conserved as well as highly variable sequences and encode outer dense fiber proteins of the sperm tail". Mol. Reprod. Dev. 51 (2): 167–75. doi:10.1002/(SICI)1098-2795(199810)51:2<167::AID-MRD6>3.0.CO;2-O. PMID 9740324. S2CID 45285336.
  • Petersen C, Füzesi L, Hoyer-Fender S (1999). "Outer dense fibre proteins from human sperm tail: molecular cloning and expression analyses of two cDNA transcripts encoding proteins of approximately 70 kDa". Mol. Hum. Reprod. 5 (7): 627–35. doi:10.1093/molehr/5.7.627. PMID 10381817.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Soung NK, Kang YH, Kim K, et al. (2007). "Requirement of hCenexin for proper mitotic functions of polo-like kinase 1 at the centrosomes". Mol. Cell. Biol. 26 (22): 8316–35. doi:10.1128/MCB.00671-06. PMC 1636773. PMID 16966375.


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