60S ribosomal protein L30

Protein found in humans
RPL30
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3VI6, 4UG0, 4V6X, 5AJ0, 3J92, 4UJC, 3J7P, 4UJE, 3J7Q, 3J7R, 4D67, 4UJD, 4V5Z, 4D5Y, 3J7O

Identifiers
AliasesRPL30, L30, ribosomal protein L30
External IDsOMIM: 180467; MGI: 98037; HomoloGene: 766; GeneCards: RPL30; OMA:RPL30 - orthologs
Gene location (Human)
Chromosome 8 (human)
Chr.Chromosome 8 (human)[1]
Chromosome 8 (human)
Genomic location for RPL30
Genomic location for RPL30
Band8q22.2Start98,024,851 bp[1]
End98,046,469 bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for RPL30
Genomic location for RPL30
Band15 B3.1|15 14.33 cMStart34,440,651 bp[2]
End34,443,786 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • parietal pleura

  • urethra

  • skin of hip

  • germinal epithelium

  • left ovary

  • skin of thigh

  • secondary oocyte

  • lactiferous duct

  • right ovary

  • caput epididymis
Top expressed in
  • ventricular zone

  • yolk sac

  • neural layer of retina

  • embryo

  • embryo

  • lip

  • morula

  • blastocyst

  • dentate gyrus of hippocampal formation granule cell

  • muscle of thigh
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • structural constituent of ribosome
  • protein binding
  • RNA binding
  • selenocysteine insertion sequence binding
Cellular component
  • cytosol
  • ribosome
  • membrane
  • focal adhesion
  • intracellular anatomical structure
  • extracellular exosome
  • nucleus
  • extracellular matrix
  • cytosolic large ribosomal subunit
  • postsynaptic density
  • polysomal ribosome
Biological process
  • protein biosynthesis
  • viral transcription
  • SRP-dependent cotranslational protein targeting to membrane
  • translational initiation
  • nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  • rRNA processing
  • antimicrobial humoral immune response mediated by antimicrobial peptide
  • cytoplasmic translation
  • liver regeneration
  • positive regulation of selenocysteine incorporation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6156

19946

Ensembl

ENSG00000156482

ENSMUSG00000058600

UniProt

P62888

P62889

RefSeq (mRNA)

NM_000989

NM_001163485
NM_009083

RefSeq (protein)

NP_000980

NP_001156957
NP_033109

Location (UCSC)Chr 8: 98.02 – 98.05 MbChr 15: 34.44 – 34.44 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

60S ribosomal protein L30 is a protein that in humans is encoded by the RPL30 gene.[5][6]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L30E family of ribosomal proteins. It is located in the cytoplasm. This gene is co-transcribed with the U72 small nucleolar RNA gene, which is located in its fourth intron. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000156482 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000058600 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Feo S, Davies B, Fried M (Jun 1992). "The mapping of seven intron-containing ribosomal protein genes shows they are unlinked in the human genome". Genomics. 13 (1): 201–207. doi:10.1016/0888-7543(92)90221-D. PMID 1577483.
  6. ^ a b "Entrez Gene: RPL30 ribosomal protein L30".

Further reading

  • Wool IG, Chan YL, Glück A (1996). "Structure and evolution of mammalian ribosomal proteins". Biochem. Cell Biol. 73 (11–12): 933–947. doi:10.1139/o95-101. PMID 8722009.
  • Kato S, Sekine S, Oh SW, et al. (1995). "Construction of a human full-length cDNA bank". Gene. 150 (2): 243–250. doi:10.1016/0378-1119(94)90433-2. PMID 7821789.
  • Kenmochi N, Kawaguchi T, Rozen S, et al. (1998). "A map of 75 human ribosomal protein genes". Genome Res. 8 (5): 509–23. doi:10.1101/gr.8.5.509. PMID 9582194.
  • Yoshihama M, Uechi T, Asakawa S, et al. (2002). "The human ribosomal protein genes: sequencing and comparative analysis of 73 genes". Genome Res. 12 (3): 379–390. doi:10.1101/gr.214202. PMC 155282. PMID 11875025.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Bouwmeester T, Bauch A, Ruffner H, et al. (2004). "A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway". Nat. Cell Biol. 6 (2): 97–105. doi:10.1038/ncb1086. PMID 14743216. S2CID 11683986.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–2127. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–1292. doi:10.1038/nbt1240. PMID 16964243. S2CID 14294292.
  • De Bortoli M, Castellino RC, Lu XY, et al. (2006). "Medulloblastoma outcome is adversely associated with overexpression of EEF1D, RPL30, and RPS20 on the long arm of chromosome 8". BMC Cancer. 6: 223. doi:10.1186/1471-2407-6-223. PMC 1578584. PMID 16968546.


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Proteins
Initiation factor
Bacterial
Mitochondrial
Archaeal
  • aIF1
  • aIF2
  • aIF5
  • aIF6
Eukaryotic
eIF1
eIF2
eIF3
eIF4
eIF5
eIF6
Elongation factor
Bacterial/​Mitochondrial
Archaeal/​Eukaryotic
Release factor
Ribosomal Proteins
Cytoplasmic
60S subunit
40S subunit
Mitochondrial
39S subunit
28S subunit
Other concepts
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